- Release Notes- Details of the database releases and ontology files
- Annotation data files- All files must be provided in the standardized GAF 2.1 format.
- Download annotation files from the Planteome SVN repository
- Data Association file format 2.1 (Source: Gene Ontology Project)
- Evidence codes for use in annotation data files
- Preparing annotation data files
- Ontology Development on Planteome GitHub Repository
- Plant Ontology
- Trait Ontology
- Plant Experimental Conditions Ontology
- Plant Stress Ontology
- Gene Ontology
- Phenotype and Trait Ontology (PATO)
- Link to OBO Foundry for more ontologies
- API documentation
- Custom References for ontology definitons
- Ontology relationship types
- Promotional information