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Planteome
Home
Publications
Found 57 results
2016
Jaiswal P
,
Cooper L
,
Elser J
,
Meier A
,
et al
. 2016.
Planteome: A Resource for Common Reference Ontologies and Applications for Plant Biology
.
Abstract
Cooper LD
,
Jaiswal P
. 2016.
The Plant Ontology: A Tool for Plant Genomics
.
Plant Bioinformatics: Methods and Protocols. 1374
2015
Oellrich A
,
Walls RL
,
Cannon EKS
,
Cannon SB
,
Cooper L
,
Gardiner J
,
Gkoutos GV
,
Harper L
,
He M
,
Hoehndorf R
et al.
. 2015.
An ontology approach to comparative phenomics in plants.
.
Plant methods. http://www.ncbi.nlm.nih.gov/pubmed/25774204?dopt=Abstract. 11:10.
Abstract
Thessen AE
,
Bunker DE
,
Buttigieg PL
,
Cooper LD
,
Dahdul WM
,
Domisch S
,
Franz NM
,
Jaiswal P
,
Lawrence-Dill CJ
,
Midford PE
et al.
. 2015.
Emerging semantics to link phenotype and environment
.
PeerJ. 3(e1470)
Cooper L
. 2015.
Planteome Overview- DivSeek 2015
.
Plant and Animal Genome XXIII Meeting.
Cooper LD
. 2015.
Curating Maize Diversity: Plant Trait Ontology Annotations for GWAS and QTL Data
.
PAG 2015 meeting, San Diego, CA .
Abstract
Harper L
,
Oellrich A
,
Walls R
,
Cannon E
,
Cannon SB
,
Cooper L
,
Gardiner J
,
Gkoutos G
,
He M
,
Hoehndorf R
et al.
. 2015.
An Ontology Approach to Comparative Phenomics in Plants
.
PAG 2015 .
Abstract
Lennon S
,
Cooper L
,
Jaiswal P
,
Ougham H
,
Stevenson DW
. 2015.
New Phytologist and the Plant Ontology: Working Together to Enhance Journal Content
.
PAG 2015.
Abstract
Deans AR
,
Lewis SE
,
Huala E
,
Anzaldo SS
,
Ashburner M
,
Balhoff JP
,
Blackburn DC
,
Blake JA
,
Burleigh GJ
,
Chanet B
et al.
. 2015.
Finding Our Way through Phenotypes
.
PLoS Biol. 13:e1002033.
Abstract
2014
Cooper L
. 2014.
Common Reference Ontologies for Plant Biology (cROP): A Platform for Integrative Plant Genomics
.
Plant and Animal Genome XXII Meeting.
Abstract
Jaiswal P
. 2014.
Plant Environmental Condition Ontology (EO)
.
Fourth Annual Summit of the Phenotype Ontology Research Coordination Network.
Cooper L
. 2014.
The Plant Ontology and the Trait Ontology: Resources for Plant Genomics
.
Workshop on Crop Ontology and Phenotyping Data Interoperability.
Lingutla N
,
Preece J
,
Todorovic S
,
Cooper L
,
Moore L
,
Jaiswal P
. 2014.
AISO: Annotation of Image Segments with Ontologies
.
Journal of Biomedical Semantics. 5:50.
Abstract
2013
Atkinson B
. 2013.
Plant Ontology, a controlled and structured plant vocabulary for all botanical disciplines
.
Botany 2013.
Abstract
Preece J
. 2013.
AISO: Annotation of Image Segments using Ontologies
.
Plant and Animal Genome XXI Conference.
Abstract
Huala E
. 2013.
Development of a Unified Phenotype Dataset for Plants
.
Plant and Animal Genome 2013.
Abstract
Cooper L
. 2013.
Development of the Reference Plant Trait Ontology: A Unified Resource for Plant Phenomics
.
Plant and Animal Genome XXI Conference.
Abstract
Jaiswal P
. 2013.
A Resource for a Common Reference Ontology for Plants
.
Plant and Animal Genome XXI Meeting.
Abstract
Arnaud E
. 2013.
The Species-Specific Crop Ontology (Generation Challenge Programme): Application and Integration into the Reference Plant Trait Ontology to Enable Data Mining on Phenotypes
.
Plant and Animal Genome XXI Conference.
Abstract
Cooper L
,
Walls RL
. 2013.
The Plant Ontology as a Tool for Comparative Plant Anatomy and Genomic Analyses
.
Plant & Cell Physiology. 54:1-23.
Abstract
Arighi CN
,
Carterette B
,
Cohen BK
,
Krallinger M
,
Wilbur JW
,
Fey P
,
Dodson R
,
Cooper L
,
Van Slyke CE
,
Dahdul W
et al.
. 2013.
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task
.
Database. 2013
Abstract
Lingutla NTV
. 2013.
Annotation of image segments with ontologies (AISO)
.
Master of Science (M.S.) in Computer Science
Abstract
2012
Preece J
. 2012.
The Plant Ontology: A Tool for Linking Plant Anatomy and Development to Genomics Across Plant Taxa
.
Genome Informatics 2012.
Abstract
Jaiswal P
. 2012.
Annotating the Maize B73 Gene Expression Atlas in the Plant Ontology- A Tool for Plant Genomics.
.
54th Annual Maize Genetics Conference.
Abstract
Walls R
,
Smith B
,
Elser J
,
Goldfain A
. 2012.
A plant disease extension of the Infectious Disease Ontology
.
International Conference on Biomedical Ontology (ICBO-2012). 897
Abstract
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